Allele information - CPF_RS11825: 6
Provenance/meta data
- locus
- CPF_RS11825
- allele
- 6
- sequence
- ATGGACAATA TAAATCATAT TTTATCAAAG GAACTTGGTA TTTCATTAAA ACAGGTAACA AGCGTTATAG AGATGTTAGA TGAAGGAAAT ACAGTACCTT TCATAGCTAG ATATAGAAAA GAAAGAACTG GTGGATTAAC AGATGAGGTT CTAAGAAAAT TTAATGAGAG ATTAACATAT CTAAGAAATT TAGAAAGTAG AAAAGAAGAT GTTTTAAGAA TAATAGAGGA GCAAGAAAAA TTAACTCCAG AATTAAAACT AAAAATTGAG AAAGCTACTA CTCTTACTGA GGTTGAAGAT ATATATAGAC CTTTTAAAGC TAAAAAGAGA ACAAGAGCTA CTATGGCTAT TGAAAAGGGA TTAAAGCCAT TAGCAGAGCT TATTCTATCA GGAGAGTTTA ATGGTGATAT AGTAGAAGAG GCTAATAAAT ATATTAATGA AGAAAAAGGT GTTAAAAATG AAGAGGAAGC TCTTCAAGGG GCTATGGATA TTATAAGTGA AATAATATCT GATAATGCTG ATTATAGAAA ATGGATTAGA AATTTTGTTC AAAAGGATGG AATAATTCAG GTAAAAGGAA GCAGTGAAGA ACAAACACCT TATGAAATGT ATTATGATTA TAAGGAACCT GTTAGAACAA TTCCATCTCA TAGAATATTA GCTATAAATA GAGGAGAAAA AGAAAAAATT CTTTCTGTTA AAGTAACTTG TAATGATGAT AAAATTATAG ATTATTTAAA TAAAAAAGTT TTAAAGGGAA ATAAAATTAC TGATAAGTAT TTAGAAGAAA GCATAAAGGA CTCCTTTAAA AGACTTATAT ATCCTTCAAT AGAAAGGGAA ATAAGAAGTG AATTAACCTC TAAGGGGGAA GAGGGCGCAA TAGATATATT TAAGGCTAAT TTAAAAGCTC TCTTAATGCA AGCACCCATT AAGGGGAAAG TTGTAATGGG CTTTGACCCT GGATTTAGAA CTGGATGTAA GGTTGCAATC TTAGATGAAA CAGGAAAATT TGTTGAGAAT ACAACTGTTT ATCCAACAGC TCCTCAAAAT AGAATTGATG AAACAATAAG TACACTTAAA AAACTTATTA AAAAACATGG AGTTCAAGTT ATTTCTTTAG GAAATGGAAC AGCTTCAAGA GAATCAGAAG AAGTAATTGC AAAGATGCTT AAGGAAATAA AAGATGAAAC AGGAAAAGAG TTATTCTATG TTATAGTTTC TGAGGCAGGA GCTTCTGTTT ATTCAGCATC AGAACTTGCA AATAAGGAAT ATCCAGACTT AGATGTAACT GTAAGAGGAG CAATTTCTAT AGGAAGAAGA CTTCAAGATC CATTAGCTGA GCTTGTTAAA ATAGATCCTA AGGCTATAGG AGTAGGACAA TATCAACATG ATGTAACTCA GAAAAAACTT GATGAATCCT TAGCAGGGAT AGTTGAGGAT TGTGTTAATA ATGTAGGAAT AGATTTAAAT ATAGCAACTC CATCACTATT AAGTTATATT TCAGGAATAA ATGCTTCAAT AGCTAAAAAT ATTGTTGATT ATAGAGAAGA AAATGGTAAG TTTAAAAGTA GAAAAGAGCT TTTAAAAGTT AAAAGATTAG GACAAAAAGC TTATGAACAA TGTGCAGGAT TCTTAAGAGT TATGGAAAGC AAAGAAGCTT TAGATAATAC TTCAGTTCAT CCAGAGTCAT ATAAAGTAGC TAAGGAACTT ATAAAAACTT TAGGATATAC AGAAGAAGAT TTAAAAAATG GCAAATTAGT AGATATAGAT GAGAGAGTAA AAGCAAAAGG AATTTCTAAC TTAGCAAAAG AATTAGAAGT TGGAGAACCA ACACTTAATG ATATTATAAA GGAAATTAAA AAGCCTGGAA GAGATCCAAG AGAGGAATTA CCTAAACCAA TATTTAAGTC TGGCGTAATA GAAATGAAAG ATTTAAAACC AGGTATGATT TTAATGGGGA CAGTTAGAAA TGTATCTGAT TTTGGTGCTT TTGTAGATAT TGGAGTTCAC CAAGATGGAT TAGTTCATAA GAGCCAAATG GCAGATAAAT TTGTTAAACA TCCACTTGAT ATAGTTAAGG TTGGAGATGT AGTAGAAGTT AGAATATTAG ATGTTGATTT AAAAAGAAAG AGAATTTCAT TATCAATGAA AAAAGAAGGT TAA
- length
- 2163
- status
- WGS: automated extract (BIGSdb)
- date entered
- 2020-10-26
- datestamp
- 2020-10-26
- sender
- Auto Definer
- curator
- Auto Definer, PubMLST (automated assignment script)
Profiles containing this allele
- cgMLST
Isolate databases
- PubMLST isolates
- Contains data for a collection of isolates that represent the total known diversity of Clostridium perfringens. For every allelic profile in the profiles database there should be at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.