Allele information - CPF_RS11825: 4
Provenance/meta data
- locus
- CPF_RS11825
- allele
- 4
- sequence
- ATGGACAATA TAAATCATAT TTTATCAAAG GAGCTTGGTA TTTCATTAAA ACAGGTAACA AGCGTTATAG AAATGTTAGA TGAAGGAAAT ACAGTACCTT TCATAGCTAG ATATAGAAAA GAAAGAACTG GTGGATTAAC AGATGAGGTT CTAAGAAAAT TTAATGAGAG ATTAACATAT CTAAGAAATT TAGAAAGTAG AAAAGAAGAT GTTTTAAGAA TAATAGAGGA GCAAGAAAAA TTAACTCCAG AATTAAAACT AAAAATTGAG AAAGCTACTA CTCTTACTGA GGTTGAAGAT ATATATAGAC CTTTTAAAGC TAAAAAGAGA ACAAGAGCTA CCATGGCTGT TGAAAAAGGA TTAAAGCCAC TAGCAGAGCT TATTTTATTA GGAGAGTTTA ATGGTGATAT AGTAGAAGAG GCTAATAAAT ATATTAATGA AGAAAAAGGT GTTAAAAATG AAGAGGAAGC TCTTCAAGGG GCTATGGATA TTATAAGTGA AATAATATCT GATAATGCTG ACTATAGAAA ATGGATTAGA AATTTTGTTC AAAAGGATGG AATAATTCAG GTAAAAGGAA GCAGTGAAGA ACAAACAACT TATGAAATGT ATTATGATTA TAAGGAACCT GTTAGAACAA TTCCATCACA TAGAATATTA GCTATAAATA GAGGAGAAAA AGAAAAAATT CTTTCTGTTA AAGTAACTTG TAATGATGAA AGAATTATAG ATTATTTAAA TAAGAAAGTT TTAAGGGAAA ATAAAATTAC TGATAAGTAT TTAGAAGAAA GTATAAAGGA CTCCTTTAAA AGACTTATAT ATCCTTCAAT AGAAAGGGAA ATAAGGAATG AATTAACCTC TAAGGGAGAA GAAGGAGCTA TTGATATATT TAAGGCTAAT TTAAAAGCTC TCTTAATGCA AGCGCCTATT AAGGGGAAAG TTGTAATGGG ATTTGACCCT GGATTTAGAA CTGGATGTAA GGTAGCAATC TTAGATGAAA CAGGAAAATT TGTTGAGAAT ACAACAGTTT ATCCAACAGC CCCTCAAAAT AGAATTGATG AAACAATAAG TACACTTAAA AAACTTATTA AAAAACATGG AGTTCAAGTT ATTTCTTTAG GAAATGGAAC AGCTTCAAGA GAATCAGAAG AAGTAATTGC AAAGATGCTT AAGGAAATAA AAGAGGAAAC AGGAAAAGAA TTATTTTATG TTATAGTTTC TGAGGCGGGA GCTTCTGTTT ATTCAGCATC AGAACTTGCA AATAAGGAAT ATCCAGACTT AGATGTAACT GTAAGAGGAG CAATTTCTAT AGGAAGAAGA CTTCAAGATC CATTAGCTGA GCTTGTTAAA ATAGATCCTA AGGCTATAGG AGTAGGACAA TATCAACATG ATGTAACTCA GAAAAAACTT GATGAATCCT TAGCAGGGAT AGTTGAGGAT TGTGTTAATA ATGTAGGAGT AGATTTAAAT ATAGCAACTC CATCATTATT AAGTTATATT TCAGGGATAA ATGCTTCAAT AGCTAAAAAT ATTGTTGATT ATAGAGAAGA AAATGGTAAG TTTAAAAGTA GAAAAGAGCT TTTAAAAGTT AAAAGATTAG GACAAAAAGC TTATGAACAA TGTGCAGGAT TCTTAAGGGT TATGGAAAGC AAAGAAGCTT TAGATAATAC CTCAGTTCAT CCAGAGTCAT ATAAAGTAGC TAAGGAACTT ATAAAAACTT TAGGATATAC AGAAGAAGAT TTAAAAAATG GCAAATTAGT AGATATAGAT GAGAGAGTAA AAGCAAAAGG AATTTCTAAC TTAGCAAAAG AATTAGAAGT TGGAGAACCA ACACTTAATG ATATTATAAA GGAAATTAAA AAGCCTGGAA GAGATCCAAG AGAGGAATTA CCTAAACCAA TATTTAAGTC TGGCGTAATA GAAATGAAAG ATTTAAAACC AGGTATGATT TTAATGGGGA CAGTTAGAAA TGTATCTGAT TTTGGTGCTT TTGTAGATAT TGGAGTTCAC CAAGATGGAT TAGTTCATAA GAGCCAAATG GCAGATAAAT TTGTTAAACA TCCACTTGAT ATAGTTAAGG TTGGAGATGT AGTAGAAGTT AGAATATTAG ATGTTGATTT AAAAAGAAAG AGAATTTCAT TATCAATGAA AAAAGAAGGT TAA
- length
- 2163
- status
- WGS: automated extract (BIGSdb)
- date entered
- 2020-10-26
- datestamp
- 2020-10-26
- sender
- Auto Definer
- curator
- Auto Definer, PubMLST (automated assignment script)
Profiles containing this allele
- cgMLST
Isolate databases
- PubMLST isolates
- Contains data for a collection of isolates that represent the total known diversity of Clostridium perfringens. For every allelic profile in the profiles database there should be at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.