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Allele information - CPF_RS11825: 18

Provenance/meta data

locus
CPF_RS11825
allele
18
sequence
ATGGACAATA TAAATCATAT TTTATCAAAG GAACTTTGTA TTTCATTAAA ACAGGTAACA AGTGTTATAG AGATGTTAGA TGAAGGAAAT ACAGTACCTT TCATAGCTAG ATATAGAAAA GAAAGAACTG GTGGATTAAC AGATGAGGTT CTAAGAAAAT TTAATGAGAG ATTAACATAT CTAAGAAATT TAGAAAGTAG AAAAGAAGAT GTTTTAAGAA TAATAGAGGA GCAAGAAAAA TTAACTCCAG AATTAAAATT AAAAATTGAG AAAGCTACTA CTCTTACTGA GGTTGAAGAT ATATATAGAC CTTTTAAAGC TAAAAAGAGA ACAAGAGCTA CTATGGCTAT TGAAAAGGGA TTAAAGCCAT TAGCAGAGCT TATTCTATCA GGAGAGTTTA ATGGTGATAT AGTAGAAGAG GCTAATAAAT ATATTAATGA AGAAAAAGGT GTTAAAAATG AAGAGGAAGC TCTTCAAGGG GCTATGGATA TTATAAGTGA AATAATATCT GATAATGCTG ATTATAGAAA ATGGATTAGA AATTTCGTTC AAAAGGATGG AATAATTCAG GTAAAAGGAA GTAGTGAAGA ACAAACACCT TATGAAATGT ATTATGATTA TAAGGAACCT GTTAGAACAA TTCCATCACA TAGAATATTA GCTATAAATA GAGGAGAAAA AGAAAAAATT CTTTCTGTTA AAGTAACTTG TAATGATGAT AAAATTATAG ATTATTTAAA TAAGAAAGTT TTAAAGGGAA ATAAAATTAC TGATAAGTAT TTAGAAGAAA GTATAAAGGA TTCCTTTAAA AGACTTATAT ATCCTTCAAT AGAAAGGGAA ATAAGAAGTG AATTAATCTC TAAGGGAGAA GAAGGAGCAA TTGATATATT TAAGGCTAAT TTAAAAGCTC TCTTAATGCA AGCTCCTATT AAGGGGAAAG TTGTAATGGG ATTTGACCCT GGATTTAGAA CAGGATGTAA GGTAGCAATC TTAGATGAAA CAGGAAAATT TGTTGAGAAT ACAACAGTTT ATCCAACAGC CCCTCAAAAT AGAATTGATG AAACAATAAG TACACTTAAA AAACTTATTA AGAAACATGG AGTTCAAGTT ATTTCTTTAG GAAATGGAAC AGCTTCAAGA GAATCAGAAG AAGTAATTGC AAAAATGCTT AAGGAAATAA AAGATGAAAC AGGAAAAGAG TTATTCTATG TTATAGTTTC TGAGGCAGGA GCTTCTGTTT ATTCAGCATC AGAACTTGCA AATAAGGAAT ATCCAGACTT AGATGTAACT GTAAGAGGAG CAATTTCTAT AGGAAGAAGA CTTCAAGATC CATTAGCTGA GCTTGTTAAA ATAGATCCTA AGGCTATAGG AGTAGGACAA TATCAACATG ATGTAACTCA GAAAAAACTT GATGAATCCT TAGCTGGGAT AGTTGAGGAT TGTGTTAATA ATGTAGGAGT AGATTTAAAT ATAGCAACTC CATCATTATT AAGTTATATT TCAGGAATAA ATGCTTCAAT AGCTAAAAAT ATTGTTGATT ATAGAGAAGA AAATGGTAAG TTTAAAAGTA GAAAAGAGCT CTTAAAAGTT AAAAGATTAG GACAAAAAGC TTATGAACAA TGTGCAGGAT TCTTAAGAGT TATGGAAAGT AAAGAAGCTT TAGATAATAC CTCAGTTCAT CCAGAGTCAT ATGGGGTAGC TAAGGAACTT ATAAAAACTT TAGGATATAC AGAAGAAGAT TTAAAAAATG GAAAATTAGT AGATATAGAT GAGAGAGTAA AAGCAAAAGG AATTTCTAAC TTAGCAAAAG AATTAGAAGT TGGAGAACCA ACACTTAATG ATATTATAAA GGAAATTAAA AAGCCTGGAA GAGATCCAAG AGAGGAACTA CCTAAACCAA TATTTAAGTC TGGCGTAATA GAAATGAAAG ATTTAAAACC AGGTATGATT TTAATGGGGA CAGTTAGAAA TGTATCTGAT TTTGGTGCTT TTGTAGATAT TGGAGTTCAC CAAGATGGAT TAGTTCATAA GAGCCAAATG GCAGATAAAT TTGTTAAACA TCCACTTGAT ATAGTTAAGG TTGGAGATAT AGTAGAAGTT AGAATATTAG ATGTTGATTT AAAAAGAAAG AGAATTTCAT TATCAATGAA AAAAGAAGGT TAA
length
2163
status
WGS: automated extract (BIGSdb)
date entered
2020-10-26
datestamp
2020-10-26
sender
Auto Definer
curator
Auto Definer, PubMLST (automated assignment script)

Profiles containing this allele

cgMLST

Isolate databases

PubMLST isolates
Contains data for a collection of isolates that represent the total known diversity of Clostridium perfringens. For every allelic profile in the profiles database there should be at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.