Allele information - CPF_RS11825: 12
Provenance/meta data
- locus
- CPF_RS11825
- allele
- 12
- sequence
- ATGGACAATA TAAATCATAT TTTATCAAAG GAACTTGGTA TTTCATTAAA ACAGGTAACA AGTGTTATAG AGATGTTAGA TGAAGGAAAT ACAGTACCTT TCATAGCTAG ATATAGAAAA GAAAGAACTG GTGGATTAAC AGATGAGGTT CTAAGAAAAT TTAATGAGAG ATTAACATAT CTAAGAAATT TAGAAAGTAG AAAAGAAGAT GTTTTAAGAA TAATAGAGGA GCAAGAAAAA TTAACTCCAG AATTAAAACT GAATATTGAG AAAGCTACTA CTCTTACTGA GGTTGAAGAT ATATATAGAC CTTTTAAAGC TAAAAAGAGA ACAAGAGCTA CTATGGCTGT TGAAAAGGGA TTAAAGCCAC TAGCTGAGCT TATTCTATCA GGAGAATTTA ATGGTGATAT AGTAGAAGCG GCTAATAAAT ATATTAATGA AGAAAAAGGT GTTAAAAATG AAGAGGAAGC TCTTCAAGGG GCTATGGATA TTATAAGTGA AATAATATCT GATAATGCTG ATTATAGAAA ATGGATTAGA AATTTTGTTC AAAAGGATGG AATAATTCAG GTAAAAGGAA GCAGTGAAGA ACAAACACCT TATGAAATGT ATTATGATTA TAAGGAACCT GTTAGAACAA TTCCATCTCA TAGAATATTA GCTATAAATA GAGGAGAAAA GGAAAAAATT CTTTCTGTTA AAGTAACTTG TAATGATGAT AAAATTATAG ATTATTTAAA TAAAAAAGTT TTAAAGGGAA ATAAAATTAC TGATAAGTAT TTAGAAGAAA GTATAAAGGA CTCCTTTAAA AGACTTATAT ATCCTTCAAT AGAAAGGGAA ATAAGAAGTG AATTAACCTC TAAGGGGGAA GAGGGAGCCA TTGATATATT TAAGGCTAAT TTAAAAGCTC TTTTAATGCA AGCTCCTATT AAGGGGAAAG TTGTAATGGG ATTTGACCCT GGATTTAGAA CTGGATGTAA GGTTGCAATC TTAGACGAAA CAGGAAAATT TGTTGAGAAT ACAACAGTTT ATCCAACAGC CCCTCAAAAT AGAATTGATG AAACAATAAG TACACTTAAA AAACTTATTA AAAAACATGG AGTTCAAGTT ATTTCTTTAG GAAATGGAAC AGCTTCAAGA GAATCAGAAG AAGTAATTGC AAAAATGCTT AAGGAAATAA AAGATGAAAC AGGAAAAGAG TTATTCTATG TTATAGTTTC TGAGGCAGGA GCTTCTGTTT ATTCAGCATC AGAACTTGCA AATAAGGAAT ATCCAGACTT AGATGTAACT GTAAGAGGCG CAATTTCTAT AGGAAGAAGA CTTCAAGATC CATTAGCTGA GCTTGTTAAA ATAGATCCTA AGGCTATAGG AGTAGGACAA TATCAACATG ATGTAACTCA GAAAAAACTT GATGAATCCT TAGCAGGGAT AGTTGAGGAT TGTGTTAATA ATGTAGGAGT AGATTTAAAT ATAGCAACTC CATCACTATT AAGTTATATT TCAGGTATAA ATGCTTCAAT AGCTAAAAAT ATTGTTGATT ATAGAGAAGA AAATGGTAAG TTTAAAAGTA GAAAAGAACT TTTAAAAGTT AAAAGATTAG GACAAAAAGC TTATGAACAA TGTGCAGGAT TCTTAAGAGT TATGGAAAGT AAAGAAGCTT TAGATAATAC CTCAGTTCAT CCAGAGTCAT ATGGGGTAGC TAAGGAACTT ATAAAAACTT TAGGATATAC AGAAGAAGAT TTAAAAAATG GCAAATTAGT AGATATAGAT GAGAGAGTAA AAGCAAAAGG AATTTCTAAC TTAGCAAAAG AATTAGAAGT TGGAGAACCA ACACTTAATG ATATTATAAA GGAAATTAAA AAGTCTGGAA GAGACCCAAG AGAGGAATTA CCTAAACCAA TATTTAAGTC TGGCGTAATA GAAATGAAAG ATTTAAAATC AGGTATGATT TTAATGGGGA CAGTTAGAAA TGTATCTGAT TTTGGTGCTT TTGTAGATAT TGGAGTTCAC CAAGATGGAT TAGTTCATAA AAGCCAAATG GCAGATAGAT TTGTTAAACA TCCACTTGAT ATAGTTAAGG TTGGAGATGT AGTAGAAGTT AGAATATTAG ATGTGGATTT AAAAAGAAAG AGAATTTCAT TATCAATGAA AAAAGAAGGT TAA
- length
- 2163
- status
- WGS: automated extract (BIGSdb)
- date entered
- 2020-10-26
- datestamp
- 2020-10-26
- sender
- Auto Definer
- curator
- Auto Definer, PubMLST (automated assignment script)
Profiles containing this allele
- cgMLST
Isolate databases
- PubMLST isolates
- Contains data for a collection of isolates that represent the total known diversity of Clostridium perfringens. For every allelic profile in the profiles database there should be at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.