Allele information - CPF_RS11825: 11

Provenance/meta data

locus
CPF_RS11825
allele
11
sequence
ATGGACAATA TAAATCATAT TTTATCAAAG GAACTTGGTA TTTCATTAAA ACAGGTAACA AGCGTTATAG AGATGTTAGA TGAAGGAAAT ACGGTACCTT TCATAGCTAG ATATAGAAAA GAAAGAACTG GTGGATTAAC AGATGAGATT CTAAGAAAAT TTAATGAGAG ATTAACATAT CTAAGAAATT TAGAAAGTAG AAAAGAAGAT GTTTTAAGAA TAATAGAGGA GCAAGAAAAA TTAACTCCAG AATTAAAACT GAAGATTGAG AAAGCTACTA CTCTTACTGA GGTTGAAGAT ATATATAGAC CTTTTAAAGC TAAAAAGAGA ACAAGAGCTA CCATGGCTGT TGAAAAAGGA TTAAAGCCAT TAGCAGAGCT TATTCTATCA GGAGAGTTTA ATGGTGATAT AGTAGAAGAG GCTAATAAAT ATATTAATGA AGAAAAAGGT GTTAAAAATG AAGAGGAAGC TCTTCAAGGG GCTATGGATA TTATAAGTGA AATAATATCT GATAATGCTG ATTATAGAAA ATGGATTAGA AATTTTGTTC AAAAGGATGG AATAATTCAG GTAAAAGGAA GCAGTGAAGA ACAAACACCT TATGAAATGT ATTATGATTA TAAGGAGCCT GTTAGAACAA TTCCATCTCA TAGAATATTA GCTATAAATA GAGGAGAAAA AGAAAAAATT CTTTCTGTTA AAGTAACTTG TAATGATGAT AAAATTATAG ATTATTTAAA TAAAAAAGTT TTAAAGGGAA ATAAAATTAC TGATAAGTAT TTAGAAGAAA GCATAAAGGA CTCCTTTAAA AGACTTATAT ATCCTTCAAT AGAAAGGGAA ATAAGGAGTG AATTAACCTC TAAGGGAGAA GAAGGAGCCA TTGATATATT TAAGGCTAAT TTAAAATCTC TTTTAATGCA AGCTCCTATT AAGGGAAAAG TTGTAATGGG ATTTGACCCT GGCTTTAGAA CTGGATGTAA GGTAGCAATC TTAGATGAAA CAGGAAAATT TGTTGAGAAT ACAACTGTTT ATCCAACAGC TCCTCAAAAT AAAATTGATG AAACAATAAG TACACTTAAA AAACTTATTA AAAAACATGG AGTTCAAGTT ATTTCTTTAG GAAATGGAAC AGCTTCAAGA GAATCAGAAG AAGTAATTGC AAAGATGCTT AAGGAAATAA AAGAGGAAAT AGGAAAAGAA TTATTTTATG TTATAGTTTC TGAGGCAGGT GCTTCTGTTT ATTCAGCATC AGAACTTGCA AATAAGGAAT ATCCAGACTT AGATGTAACT GTAAGAGGAG CAATTTCTAT AGGAAGAAGA CTTCAAGATC CATTAGCTGA GCTTGTTAAA ATAGATCCTA AGGCTATAGG AGTAGGACAA TATCAACATG ATGTAACTCA GAAAAAACTT GATGAATCCT TAGCAGGGAT AGTTGAGGAT TGTGTTAATA ATGTAGGAGT AGATTTAAAT ATAGCAACTC CATCATTATT AAGTTATATT TCAGGGATAA ATGCTTCAAT AGCTAAAAAT ATTGTTGATT ATAGAGAAGA AAATGGTAAG TTTAAAAGTA GAAAAGAGCT TTTAAAAGTT AAAAGATTAG GACAAAAAGC TTATGAACAA TGTGCAGGAT TCTTAAGAGT TATGGAAAGC AAAGAAGCTT TAGATAATAC CTCAGTTCAT CCAGAGTCAT ATAAAGTAGC TAAGGAACTT ATAAAAACTT TAGGATATAC AGAAGAAGAT TTAAAAAATG GAAAATTAGT AGATATAGAT GAGAGAGTAA AAGCAAAAGG AATTTCTAAC TTAGCAAAAG AATTAGAAGT TGGAGAACCA ACACTTAATG ACATTATAAA GGAAATTAAA AAGCCTGGAA GAGATCCAAG AGAGGAACTA CCTAAACCAA TATTTAAGTC TGGCGTAATA GAAATGAAAG ATTTAAAACC AGGTATGATT TTAATGGGGA CAGTTAGAAA TGTATCTGAT TTTGGTGCTT TTGTAGATAT TGGAGTTCAC CAAGATGGAT TAGTTCATAA GAGCCAAATG GCAGATAAAT TTGTTAAACA TCCACTTGAT ATAGTTAAGG TTGGAGATAT AGTAGAAGTT AGAATATTAG ATGTTGATTT AAAAAGAAAG AGAATTTCAT TATCAATGAA AAAAGAAGGT TAA
length
2163
status
WGS: automated extract (BIGSdb)
date entered
2020-10-26
datestamp
2020-10-26
sender
Auto Definer
curator
Auto Definer, PubMLST (automated assignment script)

Profiles containing this allele

cgMLST

Isolate databases

PubMLST isolates
Contains data for a collection of isolates that represent the total known diversity of Clostridium perfringens. For every allelic profile in the profiles database there should be at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.