Allele information - CPF_RS11040: 24

Provenance/meta data

locus
CPF_RS11040
allele
24
sequence
ATGGAAAAAA AGCAGTATGT TTATCTTTTT AATGAAGGTA ACGCAAGTAT GAAAAATTTA TTAGGTGGAA AAGGTGCTAA CTTATCCGAG ATGACTATTT TAGGAATACC AGTTCCACAA GGATTTACAG TAACAACTGA AGCATGTAAC AAGTATTATG AAGATGACAA AAAGATTTCT CAAGATATTA TTGAAGAGAT TGAAAATAAA ATGTCCCAGT TAGAAAAAAT AACTGGCAAA AAGTTTGGTT CTCTTGAAAA TCCATTATTA GTATCAGTTA GATCAGGGGC AAGAGTTTCA ATGCCAGGTA TGATGGATAC AATTCTAAAC CTTGGATTAA ATGATGAATC AGTAGAAGCT ATGGCTAAAT TAACAAATAA CCCAAGATTT GCTTATGATT CATATAGAAG ATTTATCCAA ATGTTTGCTG ATGTTGTAAT GGGTGTTGAA AAGAGACTTT TTGAAGATTT ATTAGATGAA GTTAAGGAAG AAAAGGGTTA TAAAATAGAT ACCGATTTAA CAGCAGAGGA TTTAAAAGAT TTAGTAGTAA AATTTAAAGC GCTTTATAAG AAGGAAAAGG GAGAAGATTT CCCAAGTAAT CCAAAAGAAC AACTTATAGA AGCTGTTACA GCTGTATTTA GATCATGGAA TAATCCAAGA GCTATCGTTT ATAGAAGATT AAATGATATT CCAGGAGAAT GGGGTACAGC AGTTAACGTT CAAGAGATGG TATTTGGAAA TAAGGGAGAA ACTTCAGGAA CTGGAGTTGC ATTCTCAAGA AACCCAGCTA ATGGAGATAA TGAATTATAT GGTGAGTATT TAATGAATGC TCAAGGTGAG GATGTTGTTG CAGGTATAAG AACACCAGAG CCAATAAGCC ATTTAGAAGC TCAAAATCCT GAAATATATA AGCAATTTAC AGATATAGTT AATACATTAG AAAAGCATTA TAGAGATATG CAAGACATGG AATTCACAAT AGAAGATGGA AAGTTATATT TCCTTCAAAC TAGAAATGGT AAGAGAACTG CTCAAGCAGC TTTAAAAATA GCTGTTGATT TAGTTGAAGA GGGAATGTTA ACTAAGGAAG AGGCTATATT AAAAGTTGAG CCTAAACAAT TAGATACATT ACTTCATCCT GCTTTTGCAT CTGATGGCTT AAAAGAAGCT AAAATAGTTG CAAAGGGATT ACCAGCATCA CCAGGAGCTG CCTGTGGTAA AATAGCTTTC ACAGCTGAAG AAGCTAAGGA AAGAAAAGCA AATGGTGAAA AGGTTGTATT AGTAAGATTA GAGACTTCAC CAGAAGATAT AGAAGGTATG ATTGCGGCAG AAGGTATCTT AACTGTTAGA GGAGGAATGA CTTCTCATGC AGCCGTTGTA GCAAGAGGAA TGGGTACTTG CTGCGTAGCG GGATGTGGAG AATTAAAAGT TAATGAAGAA GCTAGAACTT TAGAAGTTAA TGGACAAGTA TTAACCTTTG ATGATTACAT CTCAATAGAT GGTTCAACAG GACACATCTA TGCTGAGCAA GTTAAGACAG TATCTCCAGA AATTACAGGA CATTTCGCTA CATTTATGGG ATGGGCTGAT GAAATAAGAA AGTTAAAGGT TAGAACTAAT GCTGATACAC CAAGAGATAC TAGACAAGCT GTTGAATTTG GTGCAGAAGG TATTGGATTA TGTAGAACAG AGCATATGTT CTTTGCTGAG GATAGAATTT TAGCTGTTAG AGAAATGATC TTAGCTAAGA ATGAGGATAG TAGAAGAGTT GCATTAGAAA AACTTCTACC AATGCAAAGA GAAGACTTTA TAGGAATGTA TGAAGCTTTA GAAGAAAGAC CAGCTACAAT CAGATTCTTA GATCCACCTC TACATGAATT CTTACCAAGT GAAGAGGAAG ATATAAATGC CTTAGCTAAA GAGATTGGAG TAAGTCCAGC TGAGATTAAG AATGTAGTTG CTGAATTACA TGAATTTAAC CCAATGATGG GTCATAGAGG ATGTCGTTTA GCAGTATCTT ATCCAGAGAT AGCTGAAATG CAAACAAGAG CTGTAATAGA GGCTGCTATA GAAGTTAAGA AAAATAAAGG ATACAATATA GTTCCTGAAA TAATGATTCC TTTAATAGGT GAAATAAAAG AATTAAAGTA TGTTAAAAAT GTAGTTGTTG AAACAGCTAA GACAGTAATG GAAGAGAAGG GTGTTCAATT AGATTATAAG GTTGGAACAA TGATTGAAAT TCCAAGAGCT GCTTTAACAG CTGATAAGAT AGCAGAAGAG GCTGAGTTCT TCTCCTTTGG AACAAATGAC TTAACTCAAA TGACATTTGG ATTCTCAAGA GATGATGCAG CTAAATTCTT AAAAGATTAC TATGAAAAAG GAATATATGA GCAAGATCCA TTTGCTAAAT TAGACCAAGA AGGTGTTGGA GAGCTTATGA GAATTGCTTG TGAAAAAGGT AAGGCAACAA GACCTGATAT TAAATTAGGT ATATGTGGAG AACATGGTGG AGATCCTTCA TCTGTTGAGT TCTGCCACAA CTTAGGATTA AATTACGTAA GTTGTTCACC TTACAGAGTT CCATTAGCAA GACTTGCAGC TGCACAAGCA CAAGTTAAAA ATAAAAGATA A
length
2631
status
WGS: automated extract (BIGSdb)
date entered
2020-10-26
datestamp
2020-10-26
sender
Auto Definer
curator
Auto Definer, PubMLST (automated assignment script)

Profiles containing this allele

cgMLST

Isolate databases

PubMLST isolates
Contains data for a collection of isolates that represent the total known diversity of Clostridium perfringens. For every allelic profile in the profiles database there should be at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.