Home>Organisms>Clostridium perfringens>Clostridium perfringens typing>Allele information
Help

Allele information - CPF_RS11040: 21

Provenance/meta data

locus
CPF_RS11040
allele
21
sequence
ATGGAAAAAA AGCAGTATGT TTATCTTTTT AATGAAGGTA ACGCAAGTAT GAAAAATTTA TTAGGTGGAA AAGGTGCTAA CTTATCCGAG ATGACTATTT TAGGGATACC AGTTCCACAA GGATTTACAG TAACAACTGA AGCATGTAAT AAGTATTATG AAGATGACAA AAAGATTTCT CAAGATATTA TTGAAGAGAT TGAAAATAAA ATGTCTGAGT TAGAAAAAAT AACTGGCAAA AAATTTGGTT CTCTTGAAAA TCCATTATTA GTATCAGTTA GATCTGGAGC AAGAGTTTCA ATGCCAGGTA TGATGGATAC AATTCTAAAC CTTGGATTAA ATGATGAATC AGTAGAAGCT ATGGCTAAAT TAACAAATAA TCCAAGATTT GCTTATGATT CATATAGAAG ATTTATTCAA ATGTTTGCTG ATGTTGTAAT GGGTGTTGAA AAAAGACTTT TTGAAGATTT ACTAGACGAA GTTAAGGAAG AAAAAGGTTA TAAAATAGAT ACTGATTTAA CAGCAGAGGA TTTAAAAGAT TTAGTAGTAA AATTTAAAGC GCTTTATAAA AAGGAAAAGG GCGAAGATTT CCCAAGTAAT CCAAAAGAGC AGCTTATAGA GGCAGTTACA GCTGTATTTA GATCATGGAA TAATCCAAGA GCTATTGTTT ATAGAAGATT AAATGATATT CCAGGAGAAT GGGGTACAGC AGTTAACGTT CAAGAGATGG TATTTGGAAA TAAGGGAGAA ACTTCAGGAA CTGGAGTTGC ATTCTCAAGA AACCCAGCTA ATGGGGATAA TGAATTATAT GGTGAGTATT TAATGAATGC TCAAGGTGAG GATGTTGTTG CAGGTATAAG AACACCAGAG CCAATAAGTC ATTTAGAAGC TCAAAACCCT ACAATATATA AACAATTTAC AGATATAGTT AATACATTAG AAAAGCATTA TAGAGATATG CAAGACATGG AATTTACAAT AGAAGATGGA AAGTTATATT TCCTTCAAAC TAGAAATGGT AAGAGAACTG CTCAAGCAGC TTTAAAAATA GCTGTTGATT TAGTTGAAGA AGGAATGTTA ACTAAGGAAG AGGCTATATT AAAAGTTGAG CCTAAACAAT TAGATACATT ACTTCATCCT GCTTTTGCAT CTGATGGCTT AAAAGAAGCT AAAATAGTTG CAAAGGGGTT ACCAGCATCA CCAGGAGCTG CATGTGGTAA AATAGCTTTC ACAGCTGAAG AAGCTAAGGA AAGAAAAGCA AATGGTGAAA AGGTTGTATT AGTAAGATTA GAGACTTCAC CAGAAGATAT AGAAGGTATG ATTGCCGCAG AAGGTATCTT AACTGTTAGA GGAGGAATGA CTTCTCATGC AGCCGTTGTA GCAAGAGGAA TGGGTACTTG CTGCGTAGCA GGATGTGGAG AATTAAAAGT TAATGAAGAA GCTAGAACTT TAGAAGTTAA TGGACAAGTA TTAACCTTTG ATGATTATAT ATCAATAGAT GGTTCAACAG GACACATCTA TGCTGAACAA GTTAAGACAG TATCTCCTGA AATTACAGGA CATTTTGCTA CATTTATGGG ATGGGCTGAT GAAATAAGAA AATTAAAGGT TAGAACTAAT GCTGATACAC CAAGAGATAC TAAACAAGCT GTTGAATTTG GTGCAGAAGG TATTGGATTA TGTAGAACTG AGCATATGTT CTTTGCTGAG GATAGAATTT TAGCTGTTAG AGAAATGATC TTAGCTAAAA ATGAGGATAG TAGAAGGATT GCATTAGAAA AACTTTTACC AATGCAAAGA GAAGACTTTA TAGGAATGTA TGAAGCTTTA GAGGAAAGAC CAGCTACAAT CAGATTCTTA GATCCACCTT TACATGAATT CTTACCAAGT GAAGAGGAGG ATATAAATGC CTTAGCTAAA GAAATTGGAG TAAGTCCATC TGAGATTAAG AATGTAGTTT CTGAATTACA TGAATTTAAC CCAATGATGG GTCATAGAGG ATGTCGTTTA GCAGTATCTT ATCCAGAGAT AGCTGAAATG CAAACAAGAG CTGTTATAGA GGCTGCTATA GAAGTTAAGA AGAATAAAGG ATACAATATA GTTCCTGAAA TAATGATTCC TTTAATAGGT GAAATAAAAG AATTAAAATA TGTTAAAAAT GTAGTTGTTG AAACAGCTAA GACAGTAATG GAAGAGAAAG GTGTTCAATT AGATTATAAG GTTGGAACAA TGATTGAAAT TCCAAGAGCT GCTTTAACAG CTGATAAGAT AGCAGAAGAG GCTGAGTTCT TCTCCTTTGG AACAAATGAT TTAACTCAAA TGACATTTGG ATTCTCAAGA GATGATGCAG CTAAATTCTT AAAAGATTAC TATGAAAAAG GAATATATGA GCAAGATCCA TTTGCTAAAT TAGACCAAGA AGGCGTTGGA GAGCTTATGA GAATTGCTTG TGAAAAAGGT AAGGCAACAA GACCTGATAT TAAATTAGGT ATATGTGGAG AACATGGTGG AGATCCTTCA TCTGTTGAAT TCTGCCACAA CTTAGGATTA AATTACGTAA GTTGTTCACC TTATAGAGTT CCATTAGCAA GACTTGCAGC TGCACAAGCA CAAGTTAAAA ATAAAAGATA A
length
2631
status
WGS: automated extract (BIGSdb)
date entered
2020-10-26
datestamp
2020-10-26
sender
Auto Definer
curator
Auto Definer, PubMLST (automated assignment script)

Profiles containing this allele

cgMLST

Isolate databases

PubMLST isolates
Contains data for a collection of isolates that represent the total known diversity of Clostridium perfringens. For every allelic profile in the profiles database there should be at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.