Allele information - CPF_RS08230: 7
Provenance/meta data
- locus
- CPF_RS08230
- allele
- 7
- sequence
- ATGAAAGCAT TAAGTAGTGA TAAATTAAAA GATATAAGTT TCTTTTCGGG ACTTAATGAT GAAACCTTAA AATATATAGA GAAAAATTCT AAAGTTTTAA AAAAGAAAAA GGGAGAGCAT ATTTTTAGAG ATAAGGATAA GGTTCAGGAT ATTTTTATTG TTTTAAAAGG AAAAGTAACT CTATATAAAA TGAATGAATA TGGGCAAAAG AGAATAGTTT ACATACTTGG AGAGGAAAGC TTTTTAAATG AAGTAATAGT TGATGACCTT CCTGCTTCAA TAAATGGAGA AGCTTTTGAA AACTCAATAA TACTAAGTAT AGATAAAAAT AAATTATTAA ATATAATGAG CCAAGATTTT GAGCTTACAA AGATTGTTTT AAATGAAATG AGCAAAAAGG TAAGAAGATT ATATAGACAA ATGAAAAATG TAACTCCAAT AAAATTAGAA AAAAGAGTAG CAGCAAAGCT TTGGAAGTTA AGCAAGGATT ATGGAAAAGA AGTGCCAGAG GGGACACTTA TTGATTTAGA TATAAGTATA ACTTACTTAG CAGATATGTT TGGTTCTCCA AGAGAAAGTG TATCTAGAGC TATTAAAACC TTAAGAGATG AAAATTTAAT AATAAAAGAA AACAAAAAGA TAATAGTACC TGATAGAGAA AAAATTGCTG CATATTTTAA ATCATTAATA TAA
- length
- 693
- status
- WGS: automated extract (BIGSdb)
- date entered
- 2020-10-26
- datestamp
- 2020-10-26
- sender
- Auto Definer
- curator
- Auto Definer, PubMLST (automated assignment script)
Profiles containing this allele
- cgMLST
Isolate databases
- PubMLST isolates
- Contains data for a collection of isolates that represent the total known diversity of Clostridium perfringens. For every allelic profile in the profiles database there should be at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.