Allele information - CPF_RS08230: 6
Provenance/meta data
- locus
- CPF_RS08230
- allele
- 6
- sequence
- ATGAAAGCAT TAAGTAGTGA TAAATTAAAA GATATAAGTT TCTTTTCGGG ACTTAATGAT GAAACCTTAA AATATATAGA GAAAAATTCT AAAGTTTTAA AAAAGAAAAA GGGAGAGCAT ATTTTTAGAG ATAAAGATAA GGTTCAGGAT ATTTTTATTG TTTTAAAAGG AAAAGTAACC CTATATAAAA TGAATGAATA TGGGCAAAAG AGAATAGTTT ACATACTTGG AGAGGAAAGC TTTTTAAATG AAGTAATAGT TGATGACCTT CCTGCCTCAA TAAATGGAGA AGCTTTTGAA AACTCAATAA TACTGAGTAT AGACAAAAAT AAATTATTAA ATATAATGAG CCAAGATTTT GAGCTTACCA AGATTGTTTT AAATGAAATG AGCAAAAAGG TAAGAAGATT ATATAGACAA ATGAAAAATG TAACTCCAAT AAAATTAGAA AAAAGAGTAG CAGCAAAGCT TTGGAAGTTA AGCAAGGATT ATGGAAAAGA AGTTCCAGAG GGTACACTTA TTGATTTAGA TATAAGTATA ACTTACTTAG CAGATATGTT TGGTTCTCCA AGGGAAAGTG TATCTAGAGC TATTAAAACC TTAAGAGATG AAAATCTAAT AATAAAAGAA AACAAAAAGA TAATAGTACC TGATAGAGAA AGAATTGCTG CATATTTTAA ATCATTAATA TAA
- length
- 693
- status
- WGS: automated extract (BIGSdb)
- date entered
- 2020-10-26
- datestamp
- 2020-10-26
- sender
- Auto Definer
- curator
- Auto Definer, PubMLST (automated assignment script)
Profiles containing this allele
- cgMLST
Isolate databases
- PubMLST isolates
- Contains data for a collection of isolates that represent the total known diversity of Clostridium perfringens. For every allelic profile in the profiles database there should be at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.