Allele information - CPF_RS08230: 3
Provenance/meta data
- locus
- CPF_RS08230
- allele
- 3
- sequence
- ATGAAAGCAT TAAGTAGTGA TAAATTAAAA GATATAAGTT TCTTTTCGGG ACTTAATTAT GAAACCTTAA AATATATAGA GAAAAATTCT AAAGTTTTAA AAAAGAAAAA GGGAGAGCAT ATTTTTAGAG ATAAAGATAA GGTTGAGGAT ATTTTTATTG TTTTAAAAGG AAAAGTAACT CTATATAAAA TGAATGAATA TGGGCAAAAG AGAATAGTTT ACATACTTGG AGAGGAAAGC TTTTTAAATG AAGTAATAGT TGATGACCTT CCTGCTTCAA TAAATGGAGA AGCTTTTGAA AACTCAATAA TACTGAGTAT AGATAAAAAT AAATTATTAA ATATAATGAG CCAAGATTTT GAGCTTACAA AGATTGTTTT AAATGAAATG AGCAAGAAGG TAAGAAGATT ATATAGGCAA ATGAAAAATG TAACTCCAAT AAAATTAGAA AAAAGAGTAG CAGCAAAGCT TTGGAAGTTA AGCAAGGATT ATGGAAAAGA AGTGCCAGAG GGGACACTTA TTGACTTAGA TATAAGTATA ACTTACTTAG CAGATATGTT TGGTTCTCCA AGGGAAAGTG TATCTAGAGC TATTAAAACC TTAAGAGATG AAAATCTAAT AATAAAAGAA AACAAAAAGA TAATAGTACC TGATAGAGAA AAAATTGCTG CATATTTTAA ATCATTAATA TAA
- length
- 693
- status
- WGS: automated extract (BIGSdb)
- date entered
- 2020-10-26
- datestamp
- 2020-10-26
- sender
- Auto Definer
- curator
- Auto Definer, PubMLST (automated assignment script)
Profiles containing this allele
- cgMLST
Isolate databases
- PubMLST isolates
- Contains data for a collection of isolates that represent the total known diversity of Clostridium perfringens. For every allelic profile in the profiles database there should be at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.