Allele information - CPF_RS05800: 3
Provenance/meta data
- locus
- CPF_RS05800
- allele
- 3
- sequence
- TTGGAATTTA GACAAGCAAA TATATCTGAT TTAGATCAGA TTGTGGAAAT AATAGAATTA TCGAAAAAAT ATCTTAAAGA AACTAAGGTT GATCAATGGC AAGATGGATA TCCAGCAAAG GAAGATTTAA GAAGAGATAT AGAAAGTGGA AATAGTTATG TATTAACTAA TAAAGATGAA ATTGTTGCTA CCACTGTAAT ATCCTTAGAT GGTGAAAGTA CCTATAATTC AATATTTAAT GGGGAATGGA TTACTAATGA AGAGTATATT GTTATGCATA GGGTTGCTGT TCATGAAAAA TACAAGGGAA AAGGAATTTT CAAAGAATTA ATAAAAGAGG CAGAGAGTTT GGCTTTAAAT AAAGGGATTT TTAGCATAAA AATAGATACT CATAGAGATA ATATTTCTAT GCAGAGGGCA GTAGTAAAAA ATAATTTTAA AAGATGTGGA ATAATATATT TAGAGGATGG AAGTGAAAGA ATAGCCTTTG AAAAAGCATT GAAGTCTTTT TAG
- length
- 513
- status
- WGS: automated extract (BIGSdb)
- date entered
- 2020-10-26
- datestamp
- 2020-10-26
- sender
- Auto Definer
- curator
- Auto Definer, PubMLST (automated assignment script)
Profiles containing this allele
- cgMLST
Isolate databases
- PubMLST isolates
- Contains data for a collection of isolates that represent the total known diversity of Clostridium perfringens. For every allelic profile in the profiles database there should be at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.