Allele information - CPF_RS03265: 6
Provenance/meta data
- locus
- CPF_RS03265
- allele
- 6
- sequence
- ATGAATACAA CTCTAACAAA CCTAACTCCA ACTAAAGAAC AAAGAAAATA CCAAGAAGAT GAACTAATAG CTTTTTTAGA CCTTCAATTG AATACATTTA CAGCTAATTC TGAAAATAAT GATGAAGCTC CTTCTTTATT AAAACAAGAG ACTTCATTTA ACACAGATAT ATGGATAGAA AATTTATTTA AATTTGGATT TAAGAAAGTT ATTTTAACTG CTAAGCTTAA TAATGGTGTT TGTTTATGGC AAAGCAATTG TTCAAAAGTT AATATAAATA CTTTTTCTTT AGAGAATAAT TATGATGATT TAGTAAAAAA AGTTAGTAAA TCTTGTAAAA AGTTTGGATT TAAATTTGGT ATTCATCTTA CTTTAAAAGA TTATCTCACT TTAAACTTAA CTCCTGAAGA ATATGATAAT TACTACGCGT CTCAATTAAA AGAACTTATG ACTAATTATT CACAAATAAG TGAAGTTATT ATGGATATGA CCTCTTTAGA TGAATATTAT GACTCCCTTG ATTTTGAAAG ATACTTTAAA GTAATTAAAG AAATAAATCC TAAATGTATA ATATCTAGCC CTATTGGACC AGATGTACGT TGGACATATT ATTCAGATAT AGAGTCATCT AAAAACTATT TCTACTCTTC TGTAAATTTA AATCTTTTAA AAGAAGATTT TAACAATGAA GAGATTAGGA AAGGAACTAT TTATGGAGAC ACTTGGATTG TTGGAGAAAG TATTTACTCC CTATCTGACT GCTTAAACCA TAATAAAGAT TCATTATCAA ATTTAAAACA TGTGTATAAT AATTCATTAG GAAGAAATAC AAATTTAGTA TTAGTTTTAT CTCCTAATAC AGATGGATTA CTAAATGATA ATGAATTAAG CTTACTTTCT GATTTTTCTA AATATATAAA AGAAACTTTT TCTAATAACC TTATTAAGGG TTCTTCTATA TTAGCTACAA ATTCATCTTC TAGCGATAGC TATAATTTAA TTGATGACTA CAAAAAATCT TATTGGATAG CTAATGAAAA TGCTGTTAAC CCTTATATAG AAATAGATTT TAAAACTATC ACTGAATTTA ATATTTTAGA AATTAGAGAG TGGATTGCTG AAAGTCAAAA TGTAGAAGAA TTTAAAGTTT ATGCATATAA CAATGGTTGG TTTGAACTTT ATAATGGTAC TTCCATAGGA TATAGACATA TAGCAAAACT TAACAATATC AAAACTGATA AAATTAAAAT TTCATTTACT AAATATAAAA ACCCACCTAT GATTAATCAT ATTGGTGCAT ATTTAGGATA A
- length
- 1311
- status
- WGS: automated extract (BIGSdb)
- date entered
- 2020-10-26
- datestamp
- 2020-10-26
- sender
- Auto Definer
- curator
- Auto Definer, PubMLST (automated assignment script)
Isolate databases
- PubMLST isolates
- Contains data for a collection of isolates that represent the total known diversity of Clostridium perfringens. For every allelic profile in the profiles database there should be at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.