Allele information - CPF_RS03265: 5
Provenance/meta data
- locus
- CPF_RS03265
- allele
- 5
- sequence
- ATGAATACAA CTCTAGCAAA CCTAACTCCA ACTAAAGAAC AAAGAAAATA CCAAGAAGAT GAACTAATAG CTTTTTTAGA CCTTCAATTG AATACATTTA CAGCTAATTC TGAAAATAAT GATGAAGCTC CTTCTTTATT AAAACAAGAG ACTTCATTTA ACACAGATAT ATGGATAGAA AATTTATTTA AATTTGGATT TAAGAAAGTT ATTTTAACTG CTAAGCTTAA TAATGGTGTT TGTTTATGGC AAAGCAATTG TTCAAAAGTT AATATAAATA CTTTTTCTTT AGAGAATAAT TATGATGATT TAGTAAAAAA AGTTAGTAAA TCTTGTAAAA AGTTTGGACT TAAATTTGGT ATTCATCTTA CTTTAAAAGA TTATCTCACT TTAAACTTAA CTCCTGAAGA ATATGATAAT TACTACGCGT CTCAATTAAA AGAACTTATG ACTAATTATT CACAAATAAG TGAAGTTATT ATGGATATGA CCTCTTTAGA TGAATATTAT GACTCCCTTG ATTTTGAAAG ATACTTTAAA GTAGTTAAAG AAATAAATCC TAAATGTATC ATATCTAGCC CTATTGGACC AGATGTACGT TGGACATATT ATTCAGATAT AGAGTCATCT AAAAACTATT TCTACTCTTC TATAAATTTA AATCTTTTAA AAGAAGATTT TAACAATGAA GAGATTAGAA AAGGAAATAT TTATGGAGAT ACTTGGATTG TTGGAGAAAG TATTTACTCC CTACCTGACT GCTTAAACCA TAATAAAGAT TCATTATCAA ATTTAAAACA TGTGTATAAT AATTCATTAG GAAGAAACAC AAACTTGGTA TTAGTTTTAT CTCCTAATAC AGATGGATTA TTAAATCATA AGGAATTAAG TTTACTTTCT GATTTTTCTA AATATATAAA AGAAACTTTT TCTAATAATC TTATTAAGGG TTCATCTATA TTAGCTACAA ATTCATCTTC TAGCGATAGC TATAATTTAA TTGATGACTA TAAGAAATCT TATTGGATAG CTAATGAAAA TGCTGTTAAC CCTTATATAG AAATAGATTT TAAAACTATA ACTAAATTTA ATATTTTAGA AATTAGAGAG TGGATTGCTG AAGGTCAAAA TGTAGAAGAA TTTAAAGTTT ATGCATATAA CAATGGTTGG TTTGAACTTT ACAATGGTAC TTCTATAGGA TATAGACATA TAGCAAAACT TAACAATATC AAAACTGATA AAATTAAAAT TTCATTTACT AAATATAAAA ACCCACCTAT GATTAATCAT ATTGGTGCAT ATTTAGGATA A
- length
- 1311
- status
- WGS: automated extract (BIGSdb)
- date entered
- 2020-10-26
- datestamp
- 2020-10-26
- sender
- Auto Definer
- curator
- Auto Definer, PubMLST (automated assignment script)
Profiles containing this allele
- cgMLST
Isolate databases
- PubMLST isolates
- Contains data for a collection of isolates that represent the total known diversity of Clostridium perfringens. For every allelic profile in the profiles database there should be at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.