Publication breakdown of dataset

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54 records returned (1 - 25 displayed). Click the hyperlinks for detailed information.

PubMed idYearCitationTitle Isolates in database
285880682017Hadfield J, Harris SR, Seth-Smith HMB, Parmar S, Andersson P, Giffard PM, Schachter J, Moncada J, Ellison L, Vaulet MLG, Fermepin MR, Radebe F, Mendoza S, Ouburg S, Morré SA, Sachse K, Puolakkainen M, Korhonen SJ, Sonnex C, Wiggins R, Jalal H, Brunelli T, Casprini P, Pitt R, Ison C, Savicheva A, Shipitsyna E, Hadad R, Kari L, Burton MJ, Mabey D, Solomon AW, Lewis D, Marsh P, Unemo M, Clarke IN, Parkhill J, Thomson NR (2017) Genome Res 27: 1220-1229 Comprehensive global genome dynamics of Chlamydia trachomatis show ancient diversification followed by contemporary mixing and recent lineage expansion.
251587432014Versteeg B, van Rooijen MS, Schim van der Loeff MF, de Vries HJ, Bruisten SM (2014) BMC Infect Dis 14: 464 No indication for tissue tropism in urogenital and anorectal Chlamydia trachomatis infections using high-resolution multilocus sequence typing.
256881052015Versteeg B, Himschoot M, van den Broek IV, Bom RJ, Speksnijder AG, Schim van der Loeff MF, Bruisten SM (2015) Sex Transm Infect 91: 415-22 Urogenital Chlamydia trachomatis strain types, defined by high-resolution multilocus sequence typing, in relation to ethnicity and urogenital symptoms among a young screening population in Amsterdam, The Netherlands.
291809862017Smelov V, Vrbanac A, van Ess EF, Noz MP, Wan R, Eklund C, Morgan T, Shrier LA, Sanders B, Dillner J, de Vries HJC, Morre SA, Dean D (2017) Front Microbiol 8: 2195 Chlamydia trachomatis Strain Types Have Diversified Regionally and Globally with Evidence for Recombination across Geographic Divides.
197888052009Dean D, Bruno WJ, Wan R, Gomes JP, Devignot S, Mehari T, de Vries HJ, Morré SA, Myers G, Read TD, Spratt BG (2009) Emerg Infect Dis 15: 1385-94 Predicting phenotype and emerging strains among Chlamydia trachomatis infections.
269122992016Andersson P, Harris SR, Smith HMBS, Hadfield J, O'Neill C, Cutcliffe LT, Douglas FP, Asche LV, Mathews JD, Hutton SI, Sarovich DS, Tong SYC, Clarke IN, Thomson NR, Giffard PM (2016) Nat Commun 7: 10688 Chlamydia trachomatis from Australian Aboriginal people with trachoma are polyphyletic composed of multiple distinctive lineages.
253404632014Batteiger BE, Wan R, Williams JA, He L, Ma A, Fortenberry JD, Dean D (2014) Emerg Infect Dis 20: 1841-1847 Novel Chlamydia trachomatis Strains in Heterosexual Sex Partners, Indianapolis, Indiana, USA.
224066422012Harris SR, Clarke IN, Seth-Smith HM, Solomon AW, Cutcliffe LT, Marsh P, Skilton RJ, Holland MJ, Mabey D, Peeling RW, Lewis DA, Spratt BG, Unemo M, Persson K, Bjartling C, Brunham R, de Vries HJ, Morré SA, Speksnijder A, Bébéar CM, Clerc M, de Barbeyrac B, Parkhill J, Thomson NR (2012) Nat Genet 44: 413-9, S1 Whole-genome analysis of diverse Chlamydia trachomatis strains identifies phylogenetic relationships masked by current clinical typing.
211520372010Pannekoek Y, Dickx V, Beeckman DS, Jolley KA, Keijzers WC, Vretou E, Maiden MC, Vanrompay D, van der Ende A (2010) PLoS One 5: e14179 Multi locus sequence typing of Chlamydia reveals an association between Chlamydia psittaci genotypes and host species.
257460422015Versteeg B, Dubbink JH, Bruisten SM, McIntyre JA, Morré SA, Peters RP (2015) Sex Transm Infect 91: 510-2 High-resolution multilocus sequence typing reveals novel urogenital Chlamydia trachomatis strains in women in Mopani district, South Africa.
284729262017Seth-Smith HMB, Busó LS, Livingstone M, Sait M, Harris SR, Aitchison KD, Vretou E, Siarkou VI, Laroucau K, Sachse K, Longbottom D, Thomson NR (2017) BMC Genomics 18: 344 European Chlamydia abortus livestock isolate genomes reveal unusual stability and limited diversity, reflected in geographical signatures.
183077772008Pannekoek Y, Morelli G, Kusecek B, Morré SA, Ossewaarde JM, Langerak AA, van der Ende A (2008) BMC Microbiol 8: 42 Multi locus sequence typing of Chlamydiales: clonal groupings within the obligate intracellular bacteria Chlamydia trachomatis.
204826292010Ikryannikova LN, Shkarupeta MM, Shitikov EA, Il'ina EN, Govorun VM (2010) FEMS Immunol Med Microbiol 59: 188-96 Comparative evaluation of new typing schemes for urogenital Chlamydia trachomatis isolates.
235253592013Seth-Smith HM, Harris SR, Skilton RJ, Radebe FM, Golparian D, Shipitsyna E, Duy PT, Scott P, Cutcliffe LT, O'Neill C, Parmar S, Pitt R, Baker S, Ison CA, Marsh P, Jalal H, Lewis DA, Unemo M, Clarke IN, Parkhill J, Thomson NR (2013) Genome Res 23: 855-66 Whole-genome sequences of Chlamydia trachomatis directly from clinical samples without culture.
352394122022Pitt R, Doyle R, Theilgaard Christiansen M, Horner P, Hathorn E, Alexander S, Woodford N, Cole M, Breuer J (2022) Int J STD AIDS 33: 442-446 Whole-genome sequencing of Chlamydia trachomatis isolates from persistently infected patients.
275765372016Joseph SJ, Marti H, Didelot X, Read TD, Dean D (2016) Genome Biol Evol 8: 2613-23 Tetracycline Selective Pressure and Homologous Recombination Shape the Evolution of Chlamydia suis: A Recently Identified Zoonotic Pathogen.
238424672013Putman TE, Suchland RJ, Ivanovitch JD, Rockey DD (2013) Microbiology (Reading) 159: 2109-2117 Culture-independent sequence analysis of Chlamydia trachomatis in urogenital specimens identifies regions of recombination and in-patient sequence mutations.
203082972010Jeffrey BM, Suchland RJ, Quinn KL, Davidson JR, Stamm WE, Rockey DD (2010) Infect Immun 78: 2544-53 Genome sequencing of recent clinical Chlamydia trachomatis strains identifies loci associated with tissue tropism and regions of apparent recombination.
296415432018Feodorova VA, Konnova SS, Saltykov YV, Zaitsev SS, Subbotina IA, Polyanina TI, Ulyanov SS, Lamers SL, Gaydos CA, Quinn TC, Motin VL (2018) PLoS One 13: e0195386 Urogenital Chlamydia trachomatis multilocus sequence types and genovar distribution in chlamydia infected patients in a multi-ethnic region of Saratov, Russia.
249038642014Chu J, Sun R, Wu Z, Liu S, Li D, Zhang Q, Ling Y, Gong Y, Wu R, Wu H, Zhou J, He C, Ni P (2014) Genome Announc 2: Whole-Genome Sequences of Low-Virulence Strain CB3 and Mild Strain CB7 of Chlamydia psittaci.
217056112011Schöfl G, Voigt A, Litsche K, Sachse K, Saluz HP (2011) J Bacteriol 193: 4258 Complete genome sequences of four mammalian isolates of Chlamydophila psittaci.
251064402014Bachmann NL, Fraser TA, Bertelli C, Jelocnik M, Gillett A, Funnell O, Flanagan C, Myers GS, Timms P, Polkinghorne A (2014) BMC Genomics 15: 667 Comparative genomics of koala, cattle and sheep strains of Chlamydia pecorum.
180327212008Thomson NR, Holden MT, Carder C, Lennard N, Lockey SJ, Marsh P, Skipp P, O'Connor CD, Goodhead I, Norbertzcak H, Harris B, Ormond D, Rance R, Quail MA, Parkhill J, Stephens RS, Clarke IN (2008) Genome Res 18: 161-71 Chlamydia trachomatis: genome sequence analysis of lymphogranuloma venereum isolates.
194601332009Seth-Smith HM, Harris SR, Persson K, Marsh P, Barron A, Bignell A, Bjartling C, Clark L, Cutcliffe LT, Lambden PR, Lennard N, Lockey SJ, Quail MA, Salim O, Skilton RJ, Wang Y, Holland MJ, Parkhill J, Thomson NR, Clarke IN (2009) BMC Genomics 10: 239 Co-evolution of genomes and plasmids within Chlamydia trachomatis and the emergence in Sweden of a new variant strain.
228910322012Joseph SJ, Didelot X, Rothschild J, de Vries HJ, Morré SA, Read TD, Dean D (2012) Mol Biol Evol 29: 3933-46 Population genomics of Chlamydia trachomatis: insights on drift, selection, recombination, and population structure.