Full information on isolate 84-8471/1 (id:134)

Provenance/primary metadata

id
134
isolate
84-8471/1
species
Chlamydia psittaci
country
Unknown
host
bird
detailed host
Parrot
rMLST database accession
70094
sender
Arie van der Ende, Department of Medical Microbiology, University of Amsterdam, Netherlands
curator
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update history
83 updates show details
date entered
2012-07-25
datestamp
2022-12-01

Sequence bin

contigs
1,927
total length
1,130,766 bp
max length
7,579 bp
mean length
587 bp
N50
727
L50
470
N90
283
L90
1,449
N95
238
L95
1,667
%GC
39.60
Ns
0
gaps
0
loci tagged
290

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Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
C. trachomatis cgMLST v1.081713716

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Chlamydia psittaci Chlamydiae > Chlamydiia > Chlamydiales > Chlamydiaceae > Chlamydia > Chlamydia psittaci 100%

Analysis performed: 2021-09-06

Schemes and loci

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