Database status

Isolates

Total

100,845

Last updated

2021-02-28

• Update history

Schemes

Schemes are collections of loci. They may be indexed, in which case they have a primary key field that identifies unique combinations of alleles.

• Typing
  • MLST
  • C. jejuni / C. coli cgMLST v1.0
  • eMLST (21 partial genes)
  • Ribosomal MLST
• Other schemes
  • 1556 core loci present in 89 ST-21 complex publish
  • 1643 Gundogdu loci
  • Antibiotic resistance loci
  • Capsule_loci
  • C. coli 15-537360
  • ED pathway
  • Ribosomal Protein Genes

Loci

2055 loci defined.

Fields

• Field description
• Defined field values