Download allele sequences

Select loci by scheme | Alphabetical list | All loci by scheme

MLST (9 locus)

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Full name/product Curator(s) Last updated
gap DNA32Fixed: 589 bp 589589A. Whatmore2019-11-22
aroA DNA28Fixed: 565 bp 565565A. Whatmore2020-09-08
glk DNA48Variable: (475 min; 478 max) 475478A. Whatmore2020-09-08
dnaK DNA25Fixed: 470 bp 470470A. Whatmore2020-09-08
gyrB DNA27Fixed: 469 bp 469469A. Whatmore2020-09-08
trpE DNA29Fixed: 486 bp 486486A. Whatmore2020-09-08
cobQ DNA29Variable: (422 min; 423 max) 422423A. Whatmore2020-09-08
int_hyp DNA26Variable: (428 min; 430 max) 428431A. Whatmore2019-03-14
omp25 DNA38Variable: (490 min; 496 max) 484496A. Whatmore2019-03-13

MLST (21 locus)

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Full name/product Curator(s) Last updated
gap DNA32Fixed: 589 bp 589589A. Whatmore2019-11-22
aroA DNA28Fixed: 565 bp 565565A. Whatmore2020-09-08
glk DNA48Variable: (475 min; 478 max) 475478A. Whatmore2020-09-08
dnaK DNA25Fixed: 470 bp 470470A. Whatmore2020-09-08
gyrB DNA27Fixed: 469 bp 469469A. Whatmore2020-09-08
trpE DNA29Fixed: 486 bp 486486A. Whatmore2020-09-08
cobQ DNA29Variable: (422 min; 423 max) 422423A. Whatmore2020-09-08
int_hyp DNA26Variable: (428 min; 430 max) 428431A. Whatmore2019-03-14
omp25 DNA38Variable: (490 min; 496 max) 484496A. Whatmore2019-03-13
prpE DNA22Fixed: 468 bp 468469A. Whatmore2020-09-08
caiA DNA19Fixed: 449 bp 449449A. Whatmore2020-09-08
csdB DNA24Fixed: 487 bp 487487A. Whatmore2020-09-08
soxA DNA22Fixed: 486 bp 486486A. Whatmore2020-09-08
leuA DNA21Fixed: 482 bp 482482A. Whatmore2020-09-08
mviM DNA17Variable: (446 min; 447 max) 446447A. Whatmore2020-09-08
fumC DNA20Fixed: 452 bp 452452A. Whatmore2020-09-08
fbaA DNA19Fixed: 458 bp 458458A. Whatmore2019-09-11
ddlA DNA27Fixed: 553 bp 475553A. Whatmore2020-09-08
putA DNA25Fixed: 527 bp 527527A. Whatmore2020-09-08
mutL DNA17Fixed: 549 bp 549549A. Whatmore2020-09-08
acnA DNA25Fixed: 490 bp 490490A. Whatmore2020-09-08