Download allele sequences
Select loci by scheme | Alphabetical list | All loci by scheme
MLST
| Locus | Download | Type | Alleles | Length (setting) | Min length | Max length | Full name/product | Curator(s) | Last updated |
|---|---|---|---|---|---|---|---|---|---|
| clpA | DNA | 307 | Variable: (570 min; 582 max) | 570 | 582 | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease / clp protease subunit A | G. Margos | 2021-08-30 | |
| clpX | DNA | 270 | Variable: (621 min; 624 max) | 621 | 624 | ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease / clp protease subunit X | G. Margos | 2021-08-31 | |
| nifS | DNA | 242 | Fixed: 564 bp | 564 | 564 | aminotransferase | G. Margos | 2021-08-30 | |
| pepX | DNA | 273 | Fixed: 570 bp | 570 | 570 | X-prolyl dipeptidyl aminopeptidase / dipeptidyl aminopeptidase | G. Margos | 2021-08-30 | |
| pyrG | DNA | 283 | Variable: (603 min; 606 max) | 603 | 606 | CTP synthase | G. Margos | 2021-08-30 | |
| recG | DNA | 304 | Fixed: 651 bp | 651 | 654 | DNA recombinase / ATP-dependent DNA helicase | G. Margos | 2021-08-31 | |
| rplB | DNA | 263 | Fixed: 624 bp | 624 | 624 | 50S ribosomal protein L2 / 50S ribosomal protein L2 | G. Margos | 2021-08-30 | |
| uvrA | DNA | 274 | Fixed: 570 bp | 570 | 579 | exonuclease ABC subunit A / Excision nuclease subunit A | G. Margos | 2021-08-31 |
MLSA (legacy)
| Locus | Download | Type | Alleles | Length (setting) | Min length | Max length | Full name/product | Last updated |
|---|---|---|---|---|---|---|---|---|
| fla | DNA | 39 | Variable: No limits set | 279 | 357 | 2020-09-03 | ||
| groEL | DNA | 31 | Fixed: 260 bp | 260 | 260 | 2020-09-03 | ||
| hbb | DNA | 39 | Fixed: 327 bp | 327 | 327 | 2020-09-03 | ||
| ospA | DNA | 41 | Variable: No limits set | 208 | 211 | 2020-09-03 | ||
| recA | DNA | 42 | Fixed: 156 bp | 156 | 156 | 2020-09-03 | ||
| rrf_rrl_spacer | DNA | 45 | Variable: No limits set | 128 | 192 | 2020-09-03 | ||
| rrs | DNA | 22 | Fixed: 481 bp | 481 | 481 | 2020-09-03 |