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PubMLST
Public databases for molecular typing
and microbial genome diversity
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Home>Organisms>Bordetella spp.>Bordetella typing

Bordetella typing database

Query a sequence

Single sequence

Query a single sequence or whole genome assembly to identify allelic matches.

Batch sequences

Query multiple independent sequences in FASTA format to identify allelic matches.

Find alleles

By specific criteria

Find alleles by matching criteria (all loci together)

By locus

Select, analyse and download specific alleles from a single locus.

Search for allelic profiles

By specific criteria

Search, browse or enter list of MLST profiles

By MLST allelic profile

This can include partial matches to find related profiles.

In a batch

Look up multiple MLST allelic profiles together.
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  • Allele sequences
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  • Sequence similarity
  • Sequence comparison
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