Bordetella MLST locus/sequence definitions database
Query database
- Sequence query - query an allele sequence or genome.
- Batch sequence query - query multiple sequences in FASTA format.
- Sequence attribute search - find alleles by matching criteria (all loci together)
- Locus-specific sequence attribute search - select, analyse and download specific alleles.
- Search, browse or enter list of MLST profiles
- Search by combinations of MLST alleles - including partial matching.
- Batch profile query - lookup MLST profiles copied from a spreadsheet.
Downloads
Option settings
Submissions
General information
- Number of sequences: 36,821
- Number of profiles (MLST): 96
- Last updated: 2020-02-07
- Profile update history
- About BIGSdb
Export
- Locus sequences - FASTA format
- Profiles
- Profile sequences - XMFA / concatenated FASTA formats
Analysis
- Sequence similarity - find sequences most similar to selected allele.
- Sequence comparison - display a comparison between two sequences.
- Locus Explorer - tool for analysing allele sequences stored for particular locus.