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Download allele sequences

Select loci by scheme | Alphabetical list | All loci by scheme

ST3 MLST

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Full name/product Curator(s) Last updated
ST3_L1 DNA17Variable: No limits set 177412ST3 Locus 1 / mitochondrial ribsomal DNAsG. Clark, R. Stensvold2019-05-14
ST3_L2 DNA22Variable: No limits set 180341ST3 Locus 2 / rps3G. Clark, R. Stensvold2019-04-03
ST3_L3 DNA13Variable: No limits set 319319ST3 Locus 3 / nad4G. Clark, R. Stensvold2011-09-09
ST3_L4 DNA41Variable: No limits set 383588ST3 Locus 4 / nad2, nad11G. Clark, R. Stensvold2019-05-14
ST3_L5 DNA30Variable: No limits set 355492ST3 Locus 5 / rps12, tRNA-Asn, tRNA-LeuG. Clark, R. Stensvold2019-05-14

ST4 MLST

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Full name/product Curator(s) Last updated
ST4_L1 DNA4Variable: No limits set 379388ST4 Locus 1 / Mitochondrial ribsomal DNA, tRNA-MetG. Clark, R. Stensvold2011-09-16
ST4_L2 DNA3Variable: No limits set 527529ST4 Locus 2 / tRNA-Lys, rps13G. Clark, R. Stensvold2011-09-09
ST4_L3 DNA4Variable: No limits set 306309ST4 Locus 3 / rps8, rpl6G. Clark, R. Stensvold2011-09-16
ST4_L4 DNA3Variable: No limits set 338341ST4 Locus 4 / orf192G. Clark, R. Stensvold2011-09-09
ST4_L5 DNA3Variable: No limits set 328328ST4 Locus 5 / nad1, nad4LG. Clark, R. Stensvold2011-09-09
ST4_L6 DNA3Variable: No limits set 435440ST4 Locus 6 / tRNA-Asn, tRNA-LeuG. Clark, R. Stensvold2011-09-09

Other loci

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Full name/product Curator(s) Last updated
18S_rRNA_barcode DNA152Variable: (330 min; 600 max) 337544G. Clark, R. Stensvold2020-04-24
18S_rRNA_full_length DNA33Variable: No limits set 9861983G. Clark, R. Stensvold2019-08-27