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Sequence bin for HC-1

Contig summary statistics

Contigs
62
Total length
2,274,951
Minimum length
210
Maximum length
279,888
Mean length
36,693
N50
145,964
L50
6
N90
39,329
L90
15
N95
16,650
L95
20

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
40 Illumina NODE_5_length_279784_cov_20.273207 279888
5IlluminaNODE_4_length_271203_cov_21.558571271307gltA 142160142588 → EMBL GBK
tkt 262257262718 ←
15 Illumina NODE_71_length_226469_cov_18.228216 226573
50IlluminaNODE_3_length_185800_cov_22.914940185904pgm 118321118823 ← EMBL GBK
11 Illumina NODE_17_length_162994_cov_21.828098 163098
42IlluminaNODE_88_length_145860_cov_18.119444145964glyA 114628115134 → EMBL GBK
60 Illumina NODE_62_length_142353_cov_17.393661 142457
54IlluminaNODE_59_length_138376_cov_19.544033138480atpA 8900489492 → EMBL GBK
aspA 100277100753 →
21IlluminaNODE_13_length_119930_cov_20.525282120034glnA 82598732 → EMBL GBK
41 Illumina NODE_10_length_110362_cov_21.991989 110466
34 Illumina NODE_9_length_82708_cov_17.481960 82812
47 Illumina NODE_14_length_60797_cov_21.160830 60901
48 Illumina NODE_1_length_51298_cov_21.202211 51402
7 Illumina NODE_15_length_44540_cov_18.928850 44644
52 Illumina NODE_16_length_39225_cov_19.963722 39329
62 Illumina NODE_24_length_24246_cov_23.058277 24350
26 Illumina NODE_6_length_22954_cov_22.604601 23058
19 Illumina NODE_60_length_22199_cov_18.492455 22303
49 Illumina NODE_26_length_21336_cov_18.132593 21440
39 Illumina NODE_22_length_16546_cov_19.869938 16650
8 Illumina NODE_11_length_14538_cov_19.701403 14642
46 Illumina NODE_20_length_13091_cov_21.053473 13195
4 Illumina NODE_40_length_12206_cov_18.456907 12310
18 Illumina NODE_30_length_11297_cov_20.219793 11401
9 Illumina NODE_31_length_7717_cov_20.848906 7821
59 Illumina NODE_7_length_6687_cov_39.264244 6791
43 Illumina NODE_2_length_5562_cov_115.397881 5666
12 Illumina NODE_21_length_4232_cov_20.659498 4336
3 Illumina NODE_43_length_3424_cov_20.657711 3528
28 Illumina NODE_37_length_2536_cov_57.799290 2640
16 Illumina NODE_84_length_1645_cov_15.649848 1749
10 Illumina NODE_28_length_1520_cov_21.789474 1624
38 Illumina NODE_8_length_1443_cov_43.512127 1547
33 Illumina NODE_18_length_1431_cov_40.863731 1535
55 Illumina NODE_50_length_1359_cov_21.343636 1463
31 Illumina NODE_39_length_1297_cov_45.441788 1401
17 Illumina NODE_12_length_1171_cov_102.226303 1275
25 Illumina NODE_52_length_889_cov_47.357704 993
1 Illumina NODE_34_length_685_cov_67.375183 789
29 Illumina NODE_27_length_653_cov_57.019909 757
14 Illumina NODE_23_length_652_cov_19.930981 756
13 Illumina NODE_25_length_652_cov_67.848160 756
6 Illumina NODE_41_length_612_cov_19.364380 716
35 Illumina NODE_56_length_423_cov_40.704491 527
53 Illumina NODE_53_length_423_cov_44.813240 527
44 Illumina NODE_36_length_389_cov_43.095116 493
45 Illumina NODE_19_length_336_cov_42.886906 440
24 Illumina NODE_85_length_280_cov_44.803570 384
2 Illumina NODE_38_length_261_cov_39.498085 365
61 Illumina NODE_35_length_258_cov_45.306202 362
37 Illumina NODE_79_length_230_cov_71.330437 334
20 Illumina NODE_66_length_226_cov_465.553101 330
22 Illumina NODE_54_length_192_cov_36.000000 296
30 Illumina NODE_42_length_166_cov_43.530121 270
56 Illumina NODE_57_length_144_cov_41.437500 248
51 Illumina NODE_49_length_143_cov_55.664337 247
36 Illumina NODE_69_length_138_cov_48.195652 242
57 Illumina NODE_74_length_135_cov_35.481480 239
23 Illumina NODE_47_length_134_cov_54.261192 238
32 Illumina NODE_68_length_133_cov_39.165413 237
58 Illumina NODE_86_length_107_cov_64.654205 211
27 Illumina NODE_58_length_106_cov_36.641510 210