Wolbachia MLST allele templates (from wMel)

>ftsZ
GGTGGTACTGGAACCGGTGCAGCACCGGTAATTGCAAAAGCAGCCAGAGAAGCAAGAGCC
GCAGTTAAGGATAGAGCGCCAAAAGAAAAAAAGATATTGACTGTTGGAGTTGTAACTAAA
CCGTTCGGTTTTGAAGGTGTGCGCCGTATGCGCATTGCAGAGCTTGGACTTGAAGAACTG
CAAAAATACGTGGATACACTTATTGTCATTCCAAATCAGAATTTATTTAGAATTGCAAAT
GAAAAAACTACATTTTCTGATGCATTTAAACTTGCTGATAATGTTCTGCACATTGGCATC
AGAGGAGTAACTGACTTGATGGTCATGCCAGGGCTTATTAATCTTGACTTCGCTGATATA
GAAACAGTAATGAGCGAGATGGGCAAAGCGATGATCGGCACCGGAGAGGCAGAAGGAGAA
GATAGAGCAATTAGT

>coxA
ATGCGCACAAAAGGAATGTCATTAACTAAGATGCCACTGTTTGTTTGGTCTGTCTTGCTA
ACAGCATTTATGTTGATTGTTGCCTTACCAGTGCTTGCCGGTGCTATAACTATGCTTCTT
ACTGATCGCAATATTGGTACTTCCTTTTTTGATCCTGCCGGTGGCGGCGATCCTGTGTTA
TTTCAACATCTATTTTGGTTTTTTGGTCATCCAGAAGTTTACGTAATTATTTTTCCTGCA
TTTGGCATCATAAGTCAGGTTGTATCAACTTTTTCTCACAGACCTGTATTTGGTTACATA
GGGATGGTTTATGCAATGATAGGTATAGCAGTATTTGGCTTTATGGTTTGGGCTCACCAT
ATGTTCACTGTTGGGCTTAGTGCTGACGCTGCTGCATTTTTT

>hcpA (some A-variants contain a 6 bp-gap, while some B-variants contain a 9 bp-gap)
GATCCCGAACTCAACCCGCGCCTTCGCTCTGCTATATTTGCTGCACGCAAGGAAAATCTA
CCAAAAGATAAAATAGAAACAGCAATAAAAAATGCAACTGGTAACGTTGCTGGAGAAAAT
TACGAGGAAATCCAATATGAAGGTCATGGGCCTTCTGGCACTGCACTCATTGTCCATGTT
TTGACTAATAATCGCAACCGAACTGCTTCTGAGGTACGTTATATATTTTCTCGCAAGGGT
GGAAACTTGGGAGAAACAGGAAGTGTTAGTTACCTTTTCGATCATGTAGGCTTAATCGTC
TATAAAGCAGAGGGTGTGAATTTTGATGATTTATTCAGTCATGGAATCGAATTAGAAGTA
TTGAATGTTGAGGAAAATGACAAAGAAGGATTACACGTTATAACTTGTGAAATAAAAGAT
TTTGGTAAAGTACGCGATGCCTTT

>gatB
GAAGCTGCAGAATGCATGAAAAAATTGAGGCAGATTTTGCGTTACATTGGTTCGTGTGAT
GGTGATATGGAAAAGGGATCACTTCGTTGTGATGCAAATGTTTCTGTCCGCCTAAAAGGC
AGTAGTACATTTGGCACTCGTTGTGAAATAAAAAATCTGAACTCGATACGTTATATTGTG
CAAGCTATAGACTATGAAATACAAAGACAAATTGAAATTTTAGAAAGTGGAGAAGAAATA
AGTCAAGATACCTTATTGTTTGACGTTGCTTCGGGAAAAACAAAAGTGATGAGAAGCAAA
GAGGATGCAAGCGATTATAGATACTTCCCTGAGCCTGATTTATTACCTGTTGAGGTAAGC
CAGGATAAA

>fbpA (some B-variants contain a 6 bp-gap)
GCTGGAATGCTCCCACTTATTTTGAAACTTAATAGTTCCAACTCTTTACATTCAAAGGAT
CTAACCTCTGATCAGGCAATAACCTCTTCTGTGAAAGATGCGCTGCGTTTGGGATGCTTA
GCTGTCGGATTTACTATATATCCTGGTTCTGCTAAGTGTTTCGATATGATGGAGGAAGCC
CGTGGAATCATAGCTGAAGCCAAATCTTATGGACTTGCAGTAGTGCTATGGTCTTATCCA
CGCGGTGAAGGGATTTCCAAAGAAGGTGAAACAGCAGTTGATGTTATTGCCTATGCTGCG
CACATGGCAGCTTTGCTTGGCGCTAATATAATAAAAGTAAAACTTCCAACTAAATATTTG
GAAAGGGAGAAAATAGAAACAGAAAATATTGAATCATTATCTAAAAGAATTGAATATGTT
AAAAGGTCT

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The preferred format for citing this website in publications is:

This publication made use of the Wolbachia MLST website (http://pubmlst.org/ wolbachia/) developed by Keith Jolley and sited at the University of Oxford (Jolley et al. 2004, BMC Bioinformatics, 5:86). The development and maintenance of this site has been funded by the Wellcome Trust and the US National Science Foundation.

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Profile database

Profiles: 157
Last updated: 2008-09-25

Isolate database

Isolates: 239
Last updated: 2008-09-16