mlstdbNet

Version 2.0.0

Released: 2008-03-26
Written by Keith Jolley, © 2003-2008 University of Oxford

Jolley et al. 2004, BMC Bioinformatics, 5:86.

mlstdbNet is the software that drives a large number of publicly available MLST databases. The software is derived from the original mlstdb package written by Man-Suen Chan (Chan et al, 2001, Bioinformatics, 17, 1077-1083: download source code) and released under the GNU General Public Licence.  This implementation introduces significant improvements, allowing a distributed database structure.

mlstdbNet has been superseded by BIGSdb and is no longer being maintained.

mlstdbNet screensheet

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Help

The user guide provides further information about using the software.

Details

The mlstdbNet software is written in Perl and contains scripts for generating the web pages. New databases are configured using an XML configuration file, with no further programming required. The software runs on modest PC systems powered by Linux using the Apache web server and PostgreSQL database.

mlstdbNet is open-source software, published under the GNU General Public Licence.

The configuration files can be generated easily using the online configurator.

Obtaining the software

Software required to run mlstdbNet

Download and installation guide

Please contact Keith Jolley if you have any problems installing mlstdbNet.