Welcome to the Vibrio vulnificus MLST sequence type database

The allelic profiles are stored in a separate database from the isolate data. This server provides the following tools for querying the profiles database:

Allele sequence queries

Single locus query - check an allele sequence.
Multiple locus query - obtain an allelic profile from multiple loci sequences.
Single locus batch query - assign allele numbers to multiple sequences in MEGA or FASTA format.
BLAST - query untrimmed sequence against all loci.
Similarity - find sequences most similar to selected allele.
Compare - display a comparison between two alleles.

Allelic profile / sequence type queries

Allelic profile query - find a ST that is identical or has similarity to your profile.
Batch profile query - assign STs to multiple profiles copied from a spreadsheet.
Sequence type query - find STs that have similar allelic profiles to your query ST.
List query - find STs by a field matching an entered list.
Search database - advanced queries.
Browse database - peruse all records.

Downloads

Download allele sequences - download sequence files in multiple formats.
Download allelic profiles - download all known allelic profiles in tab-delimited text format.

Database tools

Database statistics

Number of profiles: 144
Last updated: 2013-03-29
Detailed statistics