Neisseria locus/sequence definitions database
The Neisseria PubMLST sequence definition database contains allele and profile data representing the total known diversity of Neisseria species. Every new ST deposited in this database should have a corresponding record in the isolate database.
Query database
- Sequence query - query an allele sequence.
- Batch sequence query - query multiple sequences in FASTA format.
- Sequence attribute search - find alleles by matching attributes.
- Scheme profile queries:
- Extract finetype from whole genome data (experimental)
General information
- Number of sequences: 134566
- Number of profiles: Show
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- MLST: 10214
- rplF species: 88
- Last updated: 2013-05-14
- Profile update history
- About BIGSdb
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Analysis
- Sequence similarity - find sequences most similar to selected allele.
- Sequence comparison - display a comparison between two sequences.
- Locus Explorer - tool for analysing allele sequences stored for particular locus.