Helicobacter sequence/profile definitions database
Query database
- Sequence query - query an allele sequence.
- Batch sequence query - query multiple sequences in FASTA format.
- Sequence attribute search - find alleles by matching attributes.
- Browse MLST profiles
- Search MLST profiles
- List - find MLST profiles matched to entered list
- Batch profile query - lookup MLST profiles copied from a spreadsheet.
- Search by combinations of MLST alleles - including partial matching.
General information
- Number of sequences: 16501
- Number of profiles (MLST): 2560
- Last updated: 2013-05-13
- Profile update history
- About BIGSdb
Analysis
- Sequence similarity - find sequences most similar to selected allele.
- Sequence comparison - display a comparison between two sequences.
- Locus Explorer - tool for analysing allele sequences stored for particular locus.