Campylobacter locus/sequence definitions database
The Campylobacter PubMLST sequence definition database contains allele and profile data representing the total known diversity of C. jejuni and C. coli. Every new ST deposited in this database should have a corresponding record in the isolate database.
Query database
- Sequence query - query an allele sequence.
- Batch sequence query - query multiple sequences in FASTA format.
- Sequence attribute search - find alleles by matching attributes.
- Browse MLST profiles
- Search MLST profiles
- List - find MLST profiles matched to entered list
- Batch profile query - lookup MLST profiles copied from a spreadsheet.
- Search by combinations of MLST alleles - including partial matching.
General information
- Number of sequences: 158381
- Number of profiles (MLST): 6599
- Last updated: 2013-05-15
- Profile update history
- About BIGSdb
Analysis
- Sequence similarity - find sequences most similar to selected allele.
- Sequence comparison - display a comparison between two sequences.
- Locus Explorer - tool for analysing allele sequences stored for particular locus.